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Getting Started

Prerequisites

Install Pixi for environment management:

curl -fsSL https://pixi.sh/install.sh | bash

Installation

Clone the repository and install the environment:

git clone --recurse-submodules https://github.com/jejjohnson/geostack
cd geostack
# already cloned? git submodule update --init
pixi install

Running Experiments

geostack has no experiments yet. Each one will be 1) a script in scripts/ which composes the upstream libraries, 2) a Hydra config in configs/ and 3) a stage in dvc.yaml (see the add-experiment skill). We run them with:

pixi run dvc repro

Notebook Environments

JupyterLab

pixi run -e jupyterlab lab

Marimo

pixi run -e marimo marimo-edit